Bioinformatics Skills

My favorite tools to develop algorithms are R, Python and Matlab.

R

Bioconductor

Seurat

Markdown

Shiny

Other useful packages:

ggplot2, tidyverse, dplyr, etc.


Python

Matplotlib

Pandas

NumPy

Scikit-learn

Scanpy

Matlab

ODE solvers

Curve-fitting

Optimization Toolbox